Keisuke Sehara / Mbed 2 deprecated STM32_Whisking

fast-feedback virtual target task code on STM Nucleo

Dependencies:   mbed

task.h@32:1416e015016c, 2018-12-13 (annotated)

Committer:
gwappa
Date:
Thu Dec 13 07:18:43 2018 +0000
Revision:
32:1416e015016c
Parent:
31:b320ca61a8c0 
change to use the Staged state

Who changed what in which revision?

UserRevisionLine numberNew contents of line
gwappa 1:871d3066c2ab 1 #ifndef TASK_H_
gwappa 1:871d3066c2ab 2 #define TASK_H_
gwappa 1:871d3066c2ab 3
gwappa 1:871d3066c2ab 4 #include "mbed.h"
gwappa 5:849446d19406 5 #include "config.h"
gwappa 1:871d3066c2ab 6
gwappa 1:871d3066c2ab 7 /*
gwappa 1:871d3066c2ab 8 * command characters
gwappa 1:871d3066c2ab 9 */
gwappa 9:e136394bdb39 10
gwappa 11:897ecd5413e0 11 #define CMD_TEST_REWARD 'T'
gwappa 31:b320ca61a8c0 12 #define CMD_CLEAR_INDEX 'O'
gwappa 11:897ecd5413e0 13 #define CMD_EXECUTE 'X'
gwappa 1:871d3066c2ab 14
gwappa 32:1416e015016c 15 #define CFG_DELAY_MIN 'm', (1000)
gwappa 18:66246d6c5476 16 #define CFG_DELAY_VAR 'd', (3000)
gwappa 32:1416e015016c 17 #define CFG_PREP_DUR 'p', (500)
gwappa 29:1fb060aab1f8 18 #define CFG_AUD_DUR 'a', (5000)
gwappa 18:66246d6c5476 19 #define CFG_AUD_FREQ 'f', (4)
gwappa 32:1416e015016c 20 #define CFG_RESP_DUR 'y', (1500)
gwappa 32:1416e015016c 21 #define CFG_POST_DUR 'n', (3000)
gwappa 25:56c4b22ec034 22 #define CFG_REWARD_DUR 'r', (50)
gwappa 29:1fb060aab1f8 23 #define CFG_ONSET_MIN 'o', (500)
gwappa 29:1fb060aab1f8 24 #define CFG_ONSET_STEPS 's', (10)
gwappa 29:1fb060aab1f8 25 #define CFG_VIS_DUR 'v', (800)
gwappa 29:1fb060aab1f8 26 #define CFG_VIS_TEST_EVERY 'q', (30)
gwappa 25:56c4b22ec034 27 #define CFG_WHISK_DEBOUNCE 'w', (5)
gwappa 25:56c4b22ec034 28 #define CFG_LICK_DEBOUNCE 'l', (80)
gwappa 1:871d3066c2ab 29
gwappa 1:871d3066c2ab 30 enum Mode {
gwappa 32:1416e015016c 31 Pair,
gwappa 4:fcf597f82632 32 Report,
gwappa 32:1416e015016c 33 Stage,
gwappa 11:897ecd5413e0 34 Associate,
gwappa 16:33c17c62840e 35 Motion,
gwappa 16:33c17c62840e 36 MotionAlt
gwappa 1:871d3066c2ab 37 };
gwappa 1:871d3066c2ab 38
gwappa 5:849446d19406 39 struct ModeSelection: public config::CommandResponder
gwappa 5:849446d19406 40 {
gwappa 9:e136394bdb39 41 static const char CMD_ID_MODE;
gwappa 32:1416e015016c 42 static const char CMD_MODE_PAIR;
gwappa 32:1416e015016c 43 static const char CMD_MODE_STAGE;
gwappa 9:e136394bdb39 44 static const char CMD_MODE_REPORT;
gwappa 11:897ecd5413e0 45 static const char CMD_MODE_ASSOCIATE;
gwappa 11:897ecd5413e0 46 static const char CMD_MODE_MOTION;
gwappa 16:33c17c62840e 47 static const char CMD_MODE_MOTION_ALT;
gwappa 9:e136394bdb39 48
gwappa 5:849446d19406 49 ModeSelection(); // not allowed
gwappa 5:849446d19406 50
gwappa 5:849446d19406 51 explicit ModeSelection(const Mode& defaultValue);
gwappa 1:871d3066c2ab 52
gwappa 5:849446d19406 53 virtual ~ModeSelection();
gwappa 5:849446d19406 54
gwappa 29:1fb060aab1f8 55 // the interface function defined in CommandResponder
gwappa 5:849446d19406 56 virtual bool parse(const char& c);
gwappa 5:849446d19406 57
gwappa 29:1fb060aab1f8 58 // the interface function defined in CommandResponder
gwappa 5:849446d19406 59 virtual bool writeSettings();
gwappa 1:871d3066c2ab 60
gwappa 29:1fb060aab1f8 61 // the interface function defined in CommandResponder
gwappa 5:849446d19406 62 virtual void echoback();
gwappa 5:849446d19406 63
gwappa 5:849446d19406 64 Mode value;
gwappa 5:849446d19406 65 };
gwappa 5:849446d19406 66
gwappa 5:849446d19406 67 struct Task {
gwappa 5:849446d19406 68 ModeSelection mode; // the trial mode.
gwappa 5:849446d19406 69
gwappa 5:849446d19406 70 Property<uint16_t> delay_min_ms; // the minimum duration for the delay.
gwappa 5:849446d19406 71
gwappa 5:849446d19406 72 Property<uint16_t> delay_var_ms; // the average for the (exponential) variable
gwappa 5:849446d19406 73 // duration of the delay.
gwappa 1:871d3066c2ab 74
gwappa 5:849446d19406 75 Property<uint16_t> prep_dur_ms; // the duration of the "preparatory period",
gwappa 1:871d3066c2ab 76 // during which licking is not allowed.
gwappa 1:871d3066c2ab 77
gwappa 11:897ecd5413e0 78 Property<uint16_t> aud_dur_ms; // the auditory cue duration.
gwappa 11:897ecd5413e0 79
gwappa 11:897ecd5413e0 80 Property<uint16_t> aud_tick_hz; // the frequency of auditory cue flickering.
gwappa 5:849446d19406 81
gwappa 13:8ea85a33e37a 82 Property<uint16_t> resp_dur_ms; // the size of the minimal 'response window' for the passive paradigms.
gwappa 13:8ea85a33e37a 83
gwappa 5:849446d19406 84 Property<uint16_t> post_dur_ms; // the post-reward recording duration.
gwappa 1:871d3066c2ab 85
gwappa 16:33c17c62840e 86 Property<uint16_t> reward_dur_ms; // the duration of reward.
gwappa 1:871d3066c2ab 87
gwappa 29:1fb060aab1f8 88 Property<uint16_t> onset_min_ms; // the minimum onset for the (passive) visual cue during the Associate mode.
gwappa 15:20f7f737c256 89
gwappa 29:1fb060aab1f8 90 Property<uint16_t> onset_steps_n; // the number of steps in the onset during the Associate mode.
gwappa 11:897ecd5413e0 91
gwappa 29:1fb060aab1f8 92 Property<uint16_t> vis_dur_ms; // the duration for the (passive) visual cue.
gwappa 14:af3adf5d5ddf 93
gwappa 32:1416e015016c 94 Property<uint16_t> vis_test_every; // the frequency of 'test' trials during the Pair/Report modes.
gwappa 11:897ecd5413e0 95
gwappa 25:56c4b22ec034 96 Property<uint16_t> whisk_debounce_ms; // the debounce period for whisking events.
gwappa 25:56c4b22ec034 97
gwappa 22:41163fb3fdc6 98 Property<uint16_t> lick_debounce_ms; // the debouncing period for licking events.
gwappa 22:41163fb3fdc6 99
gwappa 5:849446d19406 100 Action test_reward;
gwappa 5:849446d19406 101
gwappa 30:5f975f572ffb 102 Action clear_index;
gwappa 30:5f975f572ffb 103
gwappa 5:849446d19406 104 Action run;
gwappa 1:871d3066c2ab 105
gwappa 32:1416e015016c 106 explicit Task(const Mode& mode=Pair);
gwappa 1:871d3066c2ab 107
gwappa 1:871d3066c2ab 108 void parseFromSerial();
gwappa 1:871d3066c2ab 109
gwappa 1:871d3066c2ab 110 private:
gwappa 5:849446d19406 111 void testReward();
gwappa 30:5f975f572ffb 112 void clearTrialIndex();
gwappa 5:849446d19406 113 void runTrial();
gwappa 1:871d3066c2ab 114 void writeSettingsToSerial();
gwappa 1:871d3066c2ab 115 };
gwappa 1:871d3066c2ab 116 #endif