Program to read out a Hamamatsu S9226 linear photodiode array. Program averages each pixel's value over a number of scans to reduce noise

Dependencies:   mbed

Revision:
0:0a05dbed4fed
diff -r 000000000000 -r 0a05dbed4fed main.cpp
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/main.cpp	Fri Nov 26 20:35:49 2010 +0000
@@ -0,0 +1,107 @@
+#include "mbed.h"
+#include "TextLCD.h"
+
+DigitalOut led1(LED1);                                      //Set up all 4 LEDs for debugging purposes
+DigitalOut led2(LED2);
+DigitalOut led3(LED3);
+DigitalOut led4(LED4);
+PwmOut clk(p22);                                            //CLK signal to pin 2 of S9226
+DigitalOut start(p23);                                      //ST signal to pin 4 of S9226
+DigitalOut vgain(p24);                                      //Video gain - 0=high, 1=low
+DigitalOut itrcheck(p5);                                    //itrcheck is "1" during A-to-D conversion - debugging purpose
+DigitalIn EOS(p17);                                         //EOS signal from pin 7 of S9226
+DigitalIn clkin(p21);                                       //loopback CLK input to count integration time
+DigitalIn button1(p14);                                     //Define start/stop button
+AnalogIn video(p20);                                        //analog input signal - output from pin 6 on S9226
+InterruptIn trigger(p18);                                   //Trig signal from pin 3 of S9226
+TextLCD lcd(p8, p9, p10, p11, p12, p13);                    //Define 16 x 2 character LCD
+LocalFileSystem local("local");                             //Define file system on mbed thumbdrive
+int i,j,k, pixvalue, avnumber, avarray, avdiv, clkperiod;
+int pixels[1024], avpixels[1024];
+
+void readpixel() {                                          //ISR that takes one pixel reading, called on falling flank of "trigger"
+    itrcheck=1;
+    pixels[i] = video.read_u16()/avnumber;
+    i++;
+    itrcheck=0;
+}
+
+//void counttrig() {
+//    i++;
+//}
+
+int main() {
+    clkperiod = 40;                                         //clock period in microseconds - must be a multiple of 10
+    clk.period_us(clkperiod);                               //set clock frequency
+    clk.write(0.5);                                         //set duty cycle to 50%
+    start = 1;                                              //set start line "high"
+    vgain = 1;                                              //set video gain to "low"
+
+    //USER SETTINGS
+    avnumber = 32;                                          //THIS IS WHERE YOU SET THE NUMBER OF AVERAGES
+    avdiv = 1024/avnumber;                                  //AVNUMBER MUST BE A POWER OF 2: 2,4,8,16,32,64,128
+    //END USER SETTINGS
+
+    itrcheck=0;
+    lcd.cls();
+    while (1) {
+        lcd.locate(0,0);
+        lcd.printf("Scan __ of%3i  ", avnumber);            //Show avnumber on display
+        while (!button1)                                    //waiting till start button is pressed
+            lcd.locate(0,1);
+        lcd.printf("Preparing scans   ");
+        for (i=0; i<1025; i++) {                            //clear array of average pixel values
+            avpixels [i] = 0;
+        }
+        while (!clkin)                                      //wait for clkin to go "high" - start condition
+            wait_us(clkperiod/10);                          //give start pulse of half a clock period, while start is low
+        start = 0;
+        wait_us(clkperiod/2);
+        start = 1;
+        led1=1;
+        avarray=0;
+        i=0;
+        while (EOS) {                                       //read pixels for dummy scan until EOS goes "low"
+            trigger.fall(&readpixel);
+        }
+        wait(0.1);                                          //0.1s delay to make sure all interrupts are handled
+        lcd.cls();                                          //Clear display
+        for (int j=0; j<avnumber; j++) {                    //make "avnumber" scans and put average results in the avpixel array
+            wait(0.1);
+            lcd.locate(0,0);
+            lcd.printf("Scan%3i of%3i", j+1, avnumber);
+            while (!clkin)
+                wait_us(clkperiod/10);
+            start = 0;
+            wait_us(clkperiod/2);
+            start = 1;
+            led1 = !led1;                                   //Blink LED1 while scanning
+            i=0;
+            while (EOS) {
+                trigger.fall(&readpixel);
+            }
+            wait(0.1);
+            avarray = 0;
+            for (int i=0; i<1024; i++) {                    //divide the result by avnumber then add to sum
+                avpixels [i] = avpixels [i] + pixels [i];
+                avarray = avarray + (pixels[i]/avdiv);      //Calculate average value over entire array over this scan
+            }
+            lcd.locate(0,1);
+            lcd.printf("ArrayAv: %6i", avarray);
+        }
+        wait(0.1);
+        led1 = 0;
+        lcd.locate(0,1);
+        FILE *fp = fopen("/local/data.csv", "w");           //create or overwrite file "data.csv" on the mbed thumbdrive
+        lcd.printf("File opened     ");
+        for (int i=10; i<1014; i++) {                       //write pixel numbers and average values, skipping first and last 10 pixels
+            fprintf(fp, "%6i,%8i\n", i, avpixels[i]);
+        }
+        fclose(fp);                                         //close file "data.csv" so it can be read by the PC
+        lcd.locate(0,0);
+        lcd.printf("ArrayAv: %6i", avarray);
+        lcd.locate(0,1);
+        lcd.printf("DATA.CSV ready");
+        wait(5);
+    }
+}