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Dependencies: SDFileSystem ds3231 eeprom_Nikita mbed testUniGraphic_150217
Fork of merged_code2_3rd_nov_2017 by
Diff: ecgg.cpp
- Revision:
- 13:5d3b478ea9c7
- Parent:
- 4:6bd81bb1790d
- Child:
- 14:f5c62d30c6fc
diff -r ab85607bb10a -r 5d3b478ea9c7 ecgg.cpp
--- a/ecgg.cpp Mon May 08 05:19:22 2017 +0000
+++ b/ecgg.cpp Sat May 27 05:47:55 2017 +0000
@@ -16,30 +16,125 @@
-int ecg(int pid)
+float ecg(int pid)
{
int concatenate_value2 = 0;
- int32_t sample_sum; // static int32_t avg[1500];
- int32_t count = 0; int32_t fs = 500; int32_t w=0,w1=0;
+ // int32_t sample_sum; // static int32_t avg[1500];
+ int32_t count = 0; int32_t fs = 500;
+ uint32_t ecg_buf[N_ECG];
Timer t;
- unsigned char chk = 1;
+
+ //------------------ Declaration for Peak value detection ------------------------------------
+
+ uint32_t hi_val;uint32_t pk_val[20];unsigned int pk_pos[20]={0};unsigned int a; //uint32_t pk=0;
+ int hi_dif = 0;int j=0; // int count1 = N_ECG/fs, a_dif=0, fs1 = fs ,h=0;
+ // ------------------------- Declaration for Heart Rate calculation --------------------------
+ int n=0; //int n=10;
+ float pos_dif, HR[2], HR1,t_pos_dif;int t_sec = 60; float HR_sum = 0,HR_avg;
+ // -------------------------------------------------------------------------------------------
+
+ // unsigned char chk = 1;
pc.baud(baud_rate);
freqset(); // setting the frequency
setupfunc();
ecgsetupfunc();
- chk = 1;
+ // chk = 1;
sd_open_ECGfile(pid); // opening the ecg file
-
+ pc.printf( "Raw data is = \n");
for(int i=0; i<N_ECG; i++)
{
concatenate_value2= readvalue();
sd_write(concatenate_value2); // writing into the sd card
+ ecg_buf[i] = concatenate_value2;
pc.printf( "%d\n", concatenate_value2);
}
sd_close(); // closing the file
-
+/*
+ // ---------- reading back SD data for processing --------------------
+ sd_read_file(15);
+ printf("Reading back SD data\n");
+ for(int i=10;i<N_ECG;i++)
+ {
+ ecg_buf= sd_read();
+ //printf("%d\n",ecg_buf[i]);
+ }
+
+ sd_close(); */
+
+ //----------------------------- PEAK DETECTION AND HEART RATE CALCULATION ---------------------------------------------------
+ // -------------------------------------- PEAK DETECTION -------------------------------------------------------------
+
+ // ------------------ Main loop ---------------------------------
+for(int i=0;i<N_ECG-10;i++){
+if(ecg_buf[i]>ecg_buf[i+1])
+{
+hi_val = ecg_buf[i]; //To find the high value
+//printf("high value= %d\n",hi_val);
+a = i;
+//printf("a= %d\n",a);
+hi_dif = hi_val-ecg_buf[a+10];
+
+//a_dif = ecg_buf[a+2] - ecg_buf[a+1];
+//printf("The difference between high and low value is = %d\n",hi_dif);
+
+ // ---------------------------- If hi_val is greater than next ten input values, then compare the hi_val with the tenth input value.
+ // If the diff is greater than 10000, then it is a valid peak (pls chk the below condition)--------------------------------------------------
+ // if((hi_dif > 10000) && ((a+10) < N_ECG))
+ if(hi_dif > 10000)
+ {
+ // if(a_dif <= 0) ------------------------ add this condition if needed ----------------------
+ // {
+ pk_val[j] = hi_val; //if condition satisfied, put the "pk" value into "pk_val" buffer
+ pc.printf("peak value= %d\n",pk_val[j]);
+ pk_pos[j]=a; // also save the peak's position
+ pc.printf("peak position is = %d\n",pk_pos[j]);
+ i = a+120; // once confirmed that this is the necessary peak, skip the next 120 input values
+ n = j; // where n is the number of peaks detected
+ j = j+1;
+
+ // printf("j after peak detection is= %d\n",j);
+ // }
+ }
+ else
+ {
+ //h = a+1;
+ i = a+1;
+ // printf("i if peak not found is= %d\n",i);
+ }
+ // store the peak value position in "pk_pos"
+
+}
+}
+ // ----------------- HEART RATE LOGIC ---------------------------
- } // End of main function
+ for(int i = 0;i < n-1;i++)
+ {
+ pos_dif = pk_pos[i+1] - pk_pos[i]; // difference between two consequtive peaks
+ pc.printf("peak position diff is = %f\n",pos_dif);
+ //printf("peak position i value is = %d\n",i);
+ t_pos_dif = pos_dif/fs; // sample difference between peak positions divided by sampling frequency gives the difference value in terms of actual time
+ pc.printf("time in seconds is = %f\n",t_pos_dif);
+ HR[i] = t_sec/t_pos_dif; //HR calculation
+ pc.printf("Heart Rate is = %f\n",HR[i]);
+ // n = i;
+ HR1 = HR[0];
+
+ }
+ // ---------------------- To average individual HRs for higher number of samples -----------------------
+ /* for(int i = 0;i < 5;i++)
+ {
+ HR_sum = HR[i]+HR_sum;
+ }
+ HR_avg = HR_sum/5; // To find average of all the individual HRs calculated
+ printf("Heart Rate sum is = %f\n",HR_sum);
+ printf("Denominator = %d\n",n);
+ printf("Heart Rate = %f\n",HR_avg);
+ */
+ return HR1;
+ // return HR_avg;
+
+} // End of main function
+
