practical / Mbed 2 deprecated updatedPatient2

Dependencies:   mbed

Revision:
0:c837d6abadc5
Child:
1:417090fd8386
diff -r 000000000000 -r c837d6abadc5 main.cpp
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/main.cpp	Sat Apr 13 23:14:31 2019 +0000
@@ -0,0 +1,590 @@
+// ESP8266 Static page WEB server to control Mbed
+
+#include "mbed.h"
+#include "algorithm.h"
+#include "MAX30102.h"
+
+#define MAX_BRIGHTNESS 255
+Serial pc(USBTX, USBRX);
+Serial esp(p9, p10); 
+//Serial esp(p28, p27); // tx, rx
+
+
+// Standard Mbed LED definitions
+DigitalOut  led1(LED1);
+DigitalOut  led2(LED2);
+DigitalOut  led3(LED3);
+DigitalOut  led4(LED4);
+
+// some test values to show on web page
+AnalogIn   Ain1(p18);
+AnalogIn   Ain2(p19);
+AnalogIn LM35(p20);
+DigitalIn INT(p8);
+/*
+char ssid[32] = "hsd";     // enter WiFi router ssid inside the quotes
+char pwd [32] = "austin123"; // enter WiFi router password inside the quotes
+*/
+
+uint32_t aun_ir_buffer[500]; //IR LED sensor data
+int32_t n_ir_buffer_length;    //data length
+uint32_t aun_red_buffer[500];    //Red LED sensor data
+int32_t n_sp02; //SPO2 value
+int8_t ch_spo2_valid;   //indicator to show if the SP02 calculation is valid
+int32_t n_heart_rate;   //heart rate value
+int8_t  ch_hr_valid;    //indicator to show if the heart rate calculation is valid
+uint8_t uch_dummy;
+char uploadTimeOut=1;
+Timer timer1second;
+
+float temperature, AdcIn, Ht;
+float R1=100000, R2=10000; // resistor values to give a 10:1 reduction of measured AnalogIn voltage
+char Vcc[10];
+char Temp[10];
+char Null[10];
+
+// things for sending/receiving data over serial
+volatile int tx_in=0;
+volatile int tx_out=0;
+volatile int rx_in=0;
+volatile int rx_out=0;
+const int buffer_size = 4095;
+char tx_buffer[buffer_size+1];
+char rx_buffer[buffer_size+1];
+void Tx_interrupt();
+void Rx_interrupt();
+void send_line();
+void read_line();
+
+int DataRX;
+int update;
+int count;
+char cmdbuff[1024];
+char replybuff[4096];
+char webdata[4096]; // This may need to be bigger depending on WEB browser used
+char webbuff[4096];     // Currently using 1986 characters, Increase this if more web page data added
+char timebuf[30];
+void SendCMD(),getreply(),ReadWebData(),startserver();
+void gettime(),setRTC(),gettemp(),getbattery();
+char rx_line[1024];
+int port        =80;  // set server port
+int SERVtimeout =5;    // set server timeout in seconds in case link breaks.
+struct tm t;
+// manual set RTC values
+int minute      =20;    // 0-59
+int hour        =11;    // 2-23
+int dayofmonth  =13;    // 1-31
+int month       =4;     // 1-12
+int year        =19;    // last 2 digits
+
+int main()
+{
+    float f_temp;
+    uint32_t un_min, un_max, un_prev_data;  //variables to calculate the on-board LED brightness that reflects the heartbeats
+    int i;
+    int32_t n_brightness;
+    
+    pc.baud(115200);
+    esp.baud(9600);
+    led1=1,led2=0,led3=0, led4=0;
+    // Setup a serial interrupt function to receive data
+    esp.attach(&Rx_interrupt, Serial::RxIrq);
+    // Setup a serial interrupt function to transmit data
+    esp.attach(&Tx_interrupt, Serial::TxIrq);
+    if (time(NULL) < 1420070400) {
+        setRTC();
+    }
+    startserver();
+    DataRX=0;
+    count=0;
+     
+
+     maxim_max30102_reset(); //resets the MAX30102
+     wait(1);
+     //read and clear status register
+    maxim_max30102_read_reg(0,&uch_dummy);
+    
+    //while(pc.readable()==0)
+    {
+       // pc.printf("\x1B[2J");  //clear terminal program screen
+        pc.printf("Press any key to start conversion\n\r");
+        wait(1);
+    }
+    uch_dummy=getchar();
+    
+    maxim_max30102_init();  //initializes the MAX30102
+          
+    n_brightness=0;
+    un_min=0x3FFFF;
+    un_max=0;
+  
+    n_ir_buffer_length=500; //buffer length of 100 stores 5 seconds of samples running at 100sps
+    
+    //read the first 500 samples, and determine the signal range
+    for(i=0;i<n_ir_buffer_length;i++)
+    {
+        //while(INT.read()==1);   //wait until the interrupt pin asserts
+        
+        maxim_max30102_read_fifo((aun_red_buffer+i), (aun_ir_buffer+i));  //read from MAX30102 FIFO
+            
+        if(un_min>aun_red_buffer[i])
+            un_min=aun_red_buffer[i];    //update signal min
+        if(un_max<aun_red_buffer[i])
+            un_max=aun_red_buffer[i];    //update signal max
+        pc.printf("red=");
+        pc.printf("%i", aun_red_buffer[i]);
+        pc.printf(", ir=");
+        pc.printf("%i\n\r", aun_ir_buffer[i]);
+    }
+    un_prev_data=aun_red_buffer[i];
+
+    //calculate heart rate and SpO2 after first 500 samples (first 5 seconds of samples)
+    maxim_heart_rate_and_oxygen_saturation(aun_ir_buffer, n_ir_buffer_length, aun_red_buffer, &n_sp02, &ch_spo2_valid, &n_heart_rate, &ch_hr_valid); 
+     
+    timer1second.start(); 
+    while(1) {
+        if(DataRX==1) {
+            ReadWebData();
+            esp.attach(&Rx_interrupt, Serial::RxIrq);
+        }
+    if(n_heart_rate <=10)
+        {
+        maxim_max30102_init();  //initializes the MAX30102
+          
+    n_brightness=0;
+    un_min=0x3FFFF;
+    un_max=0;
+  
+   // n_ir_buffer_length=500; //buffer length of 100 stores 5 seconds of samples running at 100sps
+    
+    //read the first 500 samples, and determine the signal range
+    for(i=0;i<n_ir_buffer_length;i++)
+    {
+        //while(INT.read()==1);   //wait until the interrupt pin asserts
+        
+        maxim_max30102_read_fifo((aun_red_buffer+i), (aun_ir_buffer+i));  //read from MAX30102 FIFO
+            
+        if(un_min>aun_red_buffer[i])
+            un_min=aun_red_buffer[i];    //update signal min
+        if(un_max<aun_red_buffer[i])
+            un_max=aun_red_buffer[i];    //update signal max
+        pc.printf("red=");
+        pc.printf("%i", aun_red_buffer[i]);
+        pc.printf(", ir=");
+        pc.printf("%i\n\r", aun_ir_buffer[i]);
+    }
+    un_prev_data=aun_red_buffer[i];
+
+    //calculate heart rate and SpO2 after first 500 samples (first 5 seconds of samples)
+    maxim_heart_rate_and_oxygen_saturation(aun_ir_buffer, n_ir_buffer_length, aun_red_buffer, &n_sp02, &ch_spo2_valid, &n_heart_rate, &ch_hr_valid); 
+     
+        }
+        i=0;
+        un_min=0x3FFFF;
+        un_max=0;
+
+        //dumping the first 100 sets of samples in the memory and shift the last 400 sets of samples to the top
+        for(i=100;i<500;i++)
+        {
+            aun_red_buffer[i-100]=aun_red_buffer[i];
+            aun_ir_buffer[i-100]=aun_ir_buffer[i];
+            
+            //update the signal min and max
+            if(un_min>aun_red_buffer[i])
+            un_min=aun_red_buffer[i];
+            if(un_max<aun_red_buffer[i])
+            un_max=aun_red_buffer[i];
+        }
+        
+        //take 100 sets of samples before calculating the heart rate.
+        for(i=400;i<500;i++)
+        {
+            un_prev_data=aun_red_buffer[i-1];
+            while(INT.read()==1);
+            maxim_max30102_read_fifo((aun_red_buffer+i), (aun_ir_buffer+i));
+        
+            if(aun_red_buffer[i]>un_prev_data)
+            {
+                f_temp=aun_red_buffer[i]-un_prev_data;
+                f_temp/=(un_max-un_min);
+                f_temp*=MAX_BRIGHTNESS;
+                n_brightness-=(int)f_temp;
+                if(n_brightness<0)
+                    n_brightness=0;
+            }
+            else
+            {
+                f_temp=un_prev_data-aun_red_buffer[i];
+                f_temp/=(un_max-un_min);
+                f_temp*=MAX_BRIGHTNESS;
+                n_brightness+=(int)f_temp;
+                if(n_brightness>MAX_BRIGHTNESS)
+                    n_brightness=MAX_BRIGHTNESS;
+            }
+        //pc.printf("red=%i, ir=%i, HR=%i,HRvalid=%i,SpO2=%i,SPO2Valid=%i\n\r",aun_red_buffer[i],aun_ir_buffer[i],n_heart_rate, ch_hr_valid, n_sp02, ch_spo2_valid);
+         
+        }
+        maxim_heart_rate_and_oxygen_saturation(aun_ir_buffer, n_ir_buffer_length, aun_red_buffer, &n_sp02, &ch_spo2_valid, &n_heart_rate, &ch_hr_valid); 
+    //eo while 
+    sprintf(Vcc,"%i",n_heart_rate);
+           // 
+        
+        if(timer1second.read()>2)
+        {   
+            timer1second.reset();
+            // get new values
+            gettime();
+            gettemp();
+           // getbattery();
+           
+            // send new values
+           /* if(n_heart_rate>=499 || n_heart_rate <=30)
+            {   
+                sprintf(Null,"%s","Null");
+                sprintf(cmdbuff, "count,time,analog1,analog2=%d,\"%s\",\"%s\",\"%s\"\r\n",count,timebuf,Temp,Null);
+            }
+            else*/
+            {
+                count++;
+                sprintf(cmdbuff, "count,time,analog1,analog2=%d,\"%s\",\"%s\",\"%s\"\r\n",count,timebuf,Temp,Vcc);
+            }
+            SendCMD();
+            getreply();
+            
+            update=0;   
+      
+        }
+    }
+}
+
+// Reads and processes GET and POST web data
+void ReadWebData()
+{
+    wait_ms(200);
+    esp.attach(NULL,Serial::RxIrq);
+    DataRX=0;
+    memset(webdata, '\0', sizeof(webdata));
+    strcpy(webdata, rx_buffer);
+    memset(rx_buffer, '\0', sizeof(rx_buffer));
+    rx_in = 0;
+    rx_out = 0;
+    // check web data for form information
+    if( strstr(webdata, "check=led1v") != NULL ) {
+        led1=!led1;
+    }
+    if( strstr(webdata, "check=led2v") != NULL ) {
+        led2=!led2;
+    }
+    if( strstr(webdata, "check=led3v") != NULL ) {
+        led3=!led3;
+    }
+    if( strstr(webdata, "check=led4v") != NULL ) {
+        led4=!led4;
+    }
+    if( strstr(webdata, "POST") != NULL ) { // set update flag if POST request
+        update=1;
+    }
+    if( strstr(webdata, "GET") != NULL && strstr(webdata, "favicon") == NULL ) { // set update flag for GET request but do not want to update for favicon requests
+        update=1;
+    }
+}
+// Starts webserver
+void startserver()
+{
+    gettime();
+    gettemp();
+    getbattery();
+    pc.printf("++++++++++ Resetting ESP ++++++++++\r\n");
+    strcpy(cmdbuff,"node.restart()\r\n");
+    SendCMD();
+    wait(2);
+    getreply();
+    
+    pc.printf("\n++++++++++ Starting Server ++++++++++\r\n> ");
+
+    // initial values
+    sprintf(cmdbuff, "count,time,analog1,analog2=0,\"%s\",\"%s\",\"%s\"\r\n",timebuf,Temp,Vcc);
+    SendCMD();
+    getreply();
+    wait(0.5);
+
+    //create server
+    sprintf(cmdbuff, "srv=net.createServer(net.TCP,%d)\r\n",SERVtimeout);
+    SendCMD();
+    getreply();
+    wait(0.5);
+    strcpy(cmdbuff,"srv:listen(80,function(conn)\r\n");
+    SendCMD();
+    getreply();
+    wait(0.3);
+        strcpy(cmdbuff,"conn:on(\"receive\",function(conn,payload) \r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        
+        //print data to mbed
+        strcpy(cmdbuff,"print(payload)\r\n");
+        SendCMD();
+        getreply();
+        wait(0.2);
+       
+        //web page data
+        strcpy(cmdbuff,"conn:send('<!DOCTYPE html><html><meta http-equiv=\"refresh\" content=\"2\"><body><h1>Meditek Web Monitor</h1>')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.4);
+        strcpy(cmdbuff,"conn:send('Hit count: '..count..'')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.2);
+        strcpy(cmdbuff,"conn:send('<br>Last hit (based on mbed RTC time): '..time..'<br><hr>')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.4);
+        
+        strcpy(cmdbuff,"conn:send('Current Temp is : '..analog1..' C<br>Current HeartRate is : '..analog2..' count/min<br><hr>')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff,"conn:send('<form method=\"POST\"')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff, "conn:send('<p><input type=\"checkbox\" name=\"check\" value=\"led1v\"> flip LED1')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff, "conn:send('<p><input type=\"checkbox\" name=\"check\" value=\"led2v\"> flip LED2')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff, "conn:send('<p><input type=\"checkbox\" name=\"check\" value=\"led3v\"> flip LED3')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff, "conn:send('<p><input type=\"checkbox\" name=\"check\" value=\"led4v\"> flip LED4')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff,"conn:send('<p><input type=\"submit\" value=\"send-refresh\"></form>')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff, "conn:send('<p><h2>How to use:</h2><ul><li>Select a checkbox to flip on/off</li><li>Click Send-Refresh to send data and refresh values</li></ul></body></html>')\r\n");
+        SendCMD();
+        getreply();
+        wait(0.5); 
+        // end web page data
+        strcpy(cmdbuff, "conn:on(\"sent\",function(conn) conn:close() end)\r\n"); // close current connection
+        SendCMD();
+        getreply();
+        wait(0.3);
+        strcpy(cmdbuff, "end)\r\n");
+        SendCMD();
+        getreply();
+        wait(0.2);
+    strcpy(cmdbuff, "end)\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+
+    strcpy(cmdbuff, "tmr.alarm(0, 1000, 1, function()\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff, "if wifi.sta.getip() == nil then\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff, "print(\"Connecting to AP...\\n\")\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff, "else\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff, "ip, nm, gw=wifi.sta.getip()\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff,"print(\"IP Address: \",ip)\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff,"tmr.stop(0)\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff,"end\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    strcpy(cmdbuff,"end)\r\n");
+    SendCMD();
+    getreply();
+    wait(0.2);
+    
+    pc.printf("\n\n++++++++++ Ready ++++++++++\r\n\n");
+}
+
+
+// ESP Command data send
+void SendCMD()
+{
+    int i;
+    char temp_char;
+    bool empty;
+    i = 0;
+// Start Critical Section - don't interrupt while changing global buffer variables
+    NVIC_DisableIRQ(UART1_IRQn);
+    empty = (tx_in == tx_out);
+    while ((i==0) || (cmdbuff[i-1] != '\n')) {
+// Wait if buffer full
+        if (((tx_in + 1) % buffer_size) == tx_out) {
+// End Critical Section - need to let interrupt routine empty buffer by sending
+            NVIC_EnableIRQ(UART1_IRQn);
+            while (((tx_in + 1) % buffer_size) == tx_out) {
+            }
+// Start Critical Section - don't interrupt while changing global buffer variables
+            NVIC_DisableIRQ(UART1_IRQn);
+        }
+        tx_buffer[tx_in] = cmdbuff[i];
+        i++;
+        tx_in = (tx_in + 1) % buffer_size;
+    }
+    if (esp.writeable() && (empty)) {
+        temp_char = tx_buffer[tx_out];
+        tx_out = (tx_out + 1) % buffer_size;
+// Send first character to start tx interrupts, if stopped
+        esp.putc(temp_char);
+    }
+// End Critical Section
+    NVIC_EnableIRQ(UART1_IRQn);
+    return;
+}
+
+// Get Command and ESP status replies
+void getreply()
+{
+    read_line();
+    sscanf(rx_line,replybuff);
+}
+ 
+// Read a line from the large rx buffer from rx interrupt routine
+void read_line() {
+    int i;
+    i = 0;
+// Start Critical Section - don't interrupt while changing global buffer variables
+    NVIC_DisableIRQ(UART1_IRQn);
+// Loop reading rx buffer characters until end of line character
+    while ((i==0) || (rx_line[i-1] != '\r')) {
+// Wait if buffer empty
+        if (rx_in == rx_out) {
+// End Critical Section - need to allow rx interrupt to get new characters for buffer
+            NVIC_EnableIRQ(UART1_IRQn);
+            while (rx_in == rx_out) {
+            }
+// Start Critical Section - don't interrupt while changing global buffer variables
+            NVIC_DisableIRQ(UART1_IRQn);
+        }
+        rx_line[i] = rx_buffer[rx_out];
+        i++;
+        rx_out = (rx_out + 1) % buffer_size;
+    }
+// End Critical Section
+    NVIC_EnableIRQ(UART1_IRQn);
+    rx_line[i-1] = 0;
+    return;
+}
+ 
+ 
+// Interupt Routine to read in data from serial port
+void Rx_interrupt() {
+    DataRX=1;
+    //led3=1;
+// Loop just in case more than one character is in UART's receive FIFO buffer
+// Stop if buffer full
+    while ((esp.readable()) && (((rx_in + 1) % buffer_size) != rx_out)) {
+        rx_buffer[rx_in] = esp.getc();
+// Uncomment to Echo to USB serial to watch data flow
+        pc.putc(rx_buffer[rx_in]);
+        rx_in = (rx_in + 1) % buffer_size;
+    }
+    //led3=0;
+    return;
+}
+ 
+ 
+// Interupt Routine to write out data to serial port
+void Tx_interrupt() {
+    //led2=1;
+// Loop to fill more than one character in UART's transmit FIFO buffer
+// Stop if buffer empty
+    while ((esp.writeable()) && (tx_in != tx_out)) {
+        esp.putc(tx_buffer[tx_out]);
+        tx_out = (tx_out + 1) % buffer_size;
+    }
+    //led2=0;
+    return;
+}
+
+void gettime()
+{
+    time_t seconds = time(NULL);
+    strftime(timebuf,50,"%H:%M:%S %a %d %b %y", localtime(&seconds));
+}
+
+void setRTC()
+{
+    t.tm_sec = (0);             // 0-59
+    t.tm_min = (minute);        // 0-59
+    t.tm_hour = (hour);         // 0-23
+    t.tm_mday = (dayofmonth);   // 1-31
+    t.tm_mon = (month-1);       // 0-11  "0" = Jan, -1 added for Mbed RCT clock format
+    t.tm_year = ((year)+100);   // year since 1900,  current DCF year + 100 + 1900 = correct year
+    set_time(mktime(&t));       // set RTC clock
+}
+// Analog in example
+void getbattery()
+{
+    AdcIn=Ain1.read();
+    Ht = (AdcIn*3.3); // set the numeric to the exact MCU analog reference voltage for greater accuracy
+   // sprintf(Vcc,"%2.3f",Ht);
+    
+    //Continuously taking samples from MAX30102.  Heart rate and SpO2 are calculated every 1 second
+    
+    //timer1second.start();
+    //timer20ms.start();
+    
+     
+       
+}
+// Temperature example
+void gettemp()
+{
+ 
+  //float f_temp;
+     float temp_C , temp_F, average[10], averageTemp;
+    int index;
+    AdcIn=Ain2.read();
+    //Ht = (AdcIn*3.3); // set the numeric to the exact MCU analog reference voltage for greater accuracy  
+    
+    
+    averageTemp=0;
+            for(index=0; index<10; index++)
+            {
+                average[index]=LM35.read();
+                     //wait(0.02);
+            }
+            for(index=0; index<10; index++)
+            {
+                averageTemp  = (averageTemp +(average[index]/10));
+            }
+            temp_C=(averageTemp*3.685*100);
+            temp_F=(((9.0*temp_C)/5.0) + 32.0);
+            sprintf(Temp,"%2.3f",temp_C);
+            
+            pc.printf("Temperature is %.2f C, %.2f F \n\r ", temp_C,temp_F);
+
+}
\ No newline at end of file